miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|86107724|gb|BB918933.1|BB918933 CACAATGTCTACCTCTTCCATAAACGGCTTTAGTCTTTCTTCTTTGTCACATGCCAAAACTTCTATCAAGAAAACTACAT
TGAGACCCTTTGCATCTCTTAACTCTTCTTCTTCCTCTTCATCTTCTACTTTCCCTTCTCTTATTCAAGACAAACCTGTT
TTTGCTTCCTCTTCTCCTTTCATCACTCCAATTTTGAGAGAAGAAATGGGAAAGGGTTATGAAGAAGCAATTCAAGAACT
CGAGAAATTGTTGAGGGAGAAGGCCGACTTGAAAGCCACAGCAGCTGAAAAGGTTGAACAAATAACAGCTCAACTTGGAT
CAGTTACAGCTCAAGCTGCAACACCATCATCATCTGATGGTATTCCAACATCTGAAGCCTCAGAGAGGATCAAAACTGGT
TTCATTCACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAAAGCCCCCCGTA
TATGGTGTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGATTTCCAGCCAGGAGAAGCTTTTGTAGTCA
GAAATGTTGCTAACTTG




Most similar to sp|P17067|CAHC_PEA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
           sativum PE=1 SV=1
          Length = 328

 Score =  282 bits (722), Expect = 9e-76
 Identities = 147/177 (83%), Positives = 155/177 (87%), Gaps = 2/177 (1%)
 Frame = +2

Query: 53  AKTSIKKTTLRPF--ASLNXXXXXXXXTFPSLIQDKPVFASSSPFITPILREEMGKGYEE 226
           AKTS K+TTLRPF  ASLN        TFPSLIQDKPVFASSSP ITP+LREEMGKGY+E
Sbjct: 17  AKTSTKRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMGKGYDE 76

Query: 227 AIQELEKLLREKADLKATAAEKVEQITAQLGSVTAQAATPSSSDGIPTSEASERIKTGFI 406
           AI+EL+KLLREK +LKATAAEKVEQITAQLG       T SSSDGIP SEASERIKTGF+
Sbjct: 77  AIEELQKLLREKTELKATAAEKVEQITAQLG-------TTSSSDGIPKSEASERIKTGFL 129

Query: 407 HFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANL 577
           HFKKEKYDKNPALYGELAKGQSPP+MVFACSDSRVCPSHVLDFQPGEAFVVRNVANL
Sbjct: 130 HFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANL 186